Anchorpoints

Gene id
PT04G15710
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT05G22970No description available.Chr05-View
PT02G03340No description available.Chr02+View
PT09G11880No description available.Chr09-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G39210Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. APL3; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT2G21590.2); Has 8453 Blast hits to 8443 proteins in 1715 species: Archae - 406; Bacteria - 5407; Metazoa - 11; Fungi - 12; Plants - 1700; Viruses - 0; Other Eukaryotes - 917 (source: NCBI BLink). Glucose-1-phosphate adenylyltransferase family protein4+View
AT2G21590APL4; CONTAINS InterPro DOMAIN/s: Glucose-1-phosphate adenylyltransferase (InterPro:IPR011831), ADP-glucose pyrophosphorylase, conserved site (InterPro:IPR005836), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Glucose-1-phosphate adenylyltransferase family protein (TAIR:AT4G39210.1); Has 8265 Blast hits to 8149 proteins in 1719 species: Archae - 344; Bacteria - 5333; Metazoa - 20; Fungi - 9; Plants - 1699; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink). Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described. Glucose-1-phosphate adenylyltransferase family protein2+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G01700No description available.supercontig_62-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G109790Glucose-1-phosphate adenylyltransferase (AHRD V1 **** Q15I66_SOLLC)%3B contains Interpro domain(s) IPR011831 Glucose-1-phosphate adenylyltransferase IPR005836 ADP-glucose pyrophosphorylase%2C conserved sitech01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G02750name=GSVIVG01023805001;chr3+View
VV18G09240name=GSVIVG01009747001;chr18-View


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Gene id
Species
Description
Chromosome
Strand