Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT03G21260
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G04680 | No description available. | Chr16 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G20760 | Nse4, component of Smc5/6 DNA repair complex; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, cotyledon; CONTAINS InterPro DOMAIN/s: Nse4 (InterPro:IPR014854); BEST Arabidopsis thaliana protein match is: Nse4, component of Smc5/6 DNA repair complex (TAIR:AT1G51130.1); Has 305 Blast hits to 304 proteins in 129 species: Archae - 0; Bacteria - 2; Metazoa - 89; Fungi - 122; Plants - 76; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). Nse4, component of Smc5/6 DNA repair complex | 3 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G35930 | No description available. | Bd1 | - | View |
| BD3G06970 | No description available. | Bd3 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00085G00740 | No description available. | supercontig_85 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G20610 | CC_gene:Eid3,CC_gene:NSMCE4A,CC_gene:EID3,CC_gene:nse4,CC_functional_completeness:fragment,PRODUCT:expressed protein,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS08G40010 | No description available. | 8 | + | View |
| OS02G10090 | No description available. | 2 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G09560 | No description available. | Chr02 | - | View |
| OSINDICA_08G38490 | No description available. | Chr08 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB07G027660 | No description available. | chr_7 | - | View |
| SB10G024320 | No description available. | chr_10 | + | View |
| SB04G006460 | No description available. | chr_4 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI001G05390 | No description available. | scaffold_1 | + | View |
| SI006G20510 | No description available. | scaffold_6 | + | View |
| SI004G21970 | No description available. | scaffold_4 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G006460 | Non-structural maintenance of chromosome element 4 (AHRD V1 *--- B6K0D9_SCHJY)%3B contains Interpro domain(s) IPR014854 Nse4 | ch01 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV08G09300 | name=GSVIVG01033510001; | chr8 | + | View |
| VV06G06770 | name=GSVIVG01025357001; | chr6 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM06G13270 | No description available. | 6 | - | View |
| ZM04G38260 | No description available. | 4 | + | View |