Anchorpoints

Gene id
PT03G13990
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT02G17030No description available.Chr02-View
PT14G09820No description available.Chr14-View
PT01G09170No description available.Chr01+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G42200RING/U-box superfamily protein RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G49220.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT4G24015RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G10150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).4-View
AT2G46493RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G46494.1).2-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G27400CC_gene:ATL6,CC_gene:ATL52,CC_gene:ATL15,CC_gene:ATL32,CC_gene:ATL34,CC_gene:ATL43,CC_gene:ATL42,CC_gene:ATL12,CC_functional_completeness:complete,PRODUCT:Putative RING-H2 finger protein ATL12,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA04G17440CC_gene:ATL16,CC_gene:ATL1,CC_gene:ATL55,CC_gene:ATL54,CC_gene:ATL52,CC_gene:ATL51,CC_gene:ATL53,CC_gene:Os04g0590900,CC_functional_completeness:complete,PRODUCT:Putative E3 ubiquitin-protein ligase Os04g0590900,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G009320No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI003G11710No description available.scaffold_3-View
SI001G01480No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G095810Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-typech01-View
SL03G083460RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech03+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G25540No description available.5-View


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Gene id
Species
Description
Chromosome
Strand