Anchorpoints

Gene id
PT03G07860
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT01G15620No description available.Chr01-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G17380MUTS-like protein 4 (MSH4); FUNCTIONS IN: damaged DNA binding, mismatched DNA binding, ATP binding; INVOLVED IN: mismatch repair, synapsis, meiotic prophase I; LOCATED IN: condensed nuclear chromosome; EXPRESSED IN: flower, sporocyte; EXPRESSED DURING: petal differentiation and expansion stage, IL.00 inflorescence just visible; CONTAINS InterPro DOMAIN/s: DNA mismatch repair protein MutS, clamp (InterPro:IPR007861), DNA mismatch repair protein MutS, C-terminal (InterPro:IPR000432), DNA mismatch repair protein MutS, core (InterPro:IPR007696); BEST Arabidopsis thaliana protein match is: MUTS homolog 2 (TAIR:AT3G18524.1); Has 13303 Blast hits to 13154 proteins in 2712 species: Archae - 169; Bacteria - 9120; Metazoa - 661; Fungi - 837; Plants - 451; Viruses - 3; Other Eukaryotes - 2062 (source: NCBI BLink). MUTS-like protein 4 Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination.4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G27377No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00029G01780No description available.supercontig_29+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G007330DNA mismatch repair protein mutS (AHRD V1 ***- B2W010_PYRTR)%3B contains Interpro domain(s) IPR000432 DNA mismatch repair protein MutS%2C C-terminalch08-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G10640name=GSVIVG01004726001;chrUn+View


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Gene id
Species
Description
Chromosome
Strand