Anchorpoints

Gene id
PT03G05250
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G16140Encodes subunit H of photosystem I reaction center subunit VI. photosystem I subunit H-1 (PSAH-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast, photosystem I reaction center; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H2 (TAIR:AT1G52230.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). photosystem I subunit H-13-View
AT1G52230photosystem I subunit H2 (PSAH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: in 6 components; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit VI (InterPro:IPR004928); BEST Arabidopsis thaliana protein match is: photosystem I subunit H-1 (TAIR:AT3G16140.1); Has 102 Blast hits to 102 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). photosystem I subunit H2 Phosphorylation of this protein is dependent on calcium.1+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA02G09310CC_gene:PSAH1,CC_gene:PSAH2,CC_gene:PSAH,CC_functional_completeness:complete,PRODUCT:Photosystem I reaction center subunit VI%2C chloroplastic,GO:0015979,GO:0009538,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr2-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G044280Photosystem I reaction center subunit VI%2C chloroplastic (AHRD V1 ***- PSAH_SPIOL)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch12-View
SL03G120640Photosystem I reaction center subunit VI-1%2C chloroplastic (AHRD V1 ***- PSAH1_ARATH)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch03+View
SL06G066640Photosystem I reaction center subunit VI-1%2C chloroplastic (AHRD V1 ***- PSAH1_ARATH)%3B contains Interpro domain(s) IPR004928 Photosystem I reaction centre subunit VIch06+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G04980name=GSVIVG01017071001;chr9-View


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Gene id
Species
Description
Chromosome
Strand