Anchorpoints

Gene id
PT02G10350
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT05G15780No description available.Chr05+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G65420CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1). CYCLIN D4;1 Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G38417No description available.Bd3+View
BD4G32556No description available.Bd4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00360No description available.supercontig_55-View
CP00309G00080No description available.supercontig_309+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G25530CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA09G15450CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View
MA06G10520CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Putative Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA07G13200CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View
MA03G06820CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3-View
MA10G19680CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA10G31020CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G11410cyclin, putative, expressed Cyclin-D3-16+View
OS09G29100cyclin, putative, expressed Cyclin-D4-19+View
OS08G37390Cyclin-D4-2 cyclin, putative, expressed8+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_06G10870No description available.Chr06+View
OSINDICA_08G35650No description available.Chr08+View
OSINDICA_09G23310No description available.Chr09+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G027020No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G24250No description available.scaffold_2+View
SI004G08770No description available.scaffold_4+View
SI006G18490No description available.scaffold_6+View
SI009G39060No description available.scaffold_9+View
SI001G34080No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G087900Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin Dch12-View
SL11G010460Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch11-View
SL04G076040Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin Dch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04300name=GSVIVG01009139001;chr18-View
VV00G06850name=GSVIVG01003610001;chrUn+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G16590cyclin delta-27+View
ZM02G31970D-type cyclin Fragment2+View
ZM04G27270LOC5419154+View


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Gene id
Species
Description
Chromosome
Strand