Anchorpoints

Gene id
PT02G03900
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT10G07240No description available.Chr10+View
PT13G04520No description available.Chr13+View
PT05G22310No description available.Chr05-View
PT08G16610No description available.Chr08-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G23230encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G43410.1); Has 5843 Blast hits to 5635 proteins in 250 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 5822; Viruses - 4; Other Eukaryotes - 15 (source: NCBI BLink).3-View
AT2G31230encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. ethylene-responsive element binding factor 15 ethylene-responsive element binding factor 15 (ERF15); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: ethylene mediated signaling pathway, regulation of transcription, DNA-dependent, response to chitin; LOCATED IN: chloroplast; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: octadecanoid-responsive Arabidopsis AP2/ERF 59 (TAIR:AT1G06160.1); Has 7638 Blast hits to 6656 proteins in 461 species: Archae - 0; Bacteria - 190; Metazoa - 867; Fungi - 122; Plants - 5748; Viruses - 12; Other Eukaryotes - 699 (source: NCBI BLink).2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G75040No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00044G00660No description available.supercontig_44-View
CP00050G00270No description available.supercontig_50+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G05590AP2 domain containing protein, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G04760No description available.Chr03+View
OSINDICA_08G43780No description available.Chr08+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G046920No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G55440No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G089910Ethylene responsive transcription factor 1a (AHRD V1 *-*- C0J9I9_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch09+View
SL09G066340Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch09+View
SL03G005500Ethylene-responsive transcription factor 14 (AHRD V1 **** ERF97_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G10790name=GSVIVG01028312001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G03740No description available.1+View


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Gene id
Species
Description
Chromosome
Strand