Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT02G02680
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT07G01430 | No description available. | Chr07 | + | View |
| PT05G11670 | No description available. | Chr05 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G75600 | Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleosome; EXPRESSED IN: root, flower, leaf, pollen tube; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 14606 Blast hits to 14598 proteins in 7248 species: Archae - 0; Bacteria - 0; Metazoa - 10603; Fungi - 2033; Plants - 1270; Viruses - 0; Other Eukaryotes - 700 (source: NCBI BLink). Histone superfamily protein | 1 | + | View |
| AT1G19890 | histone 3.3, male-gamete-specific expression. Direct target promoter of the male germline-specific transcription factor DUO1. male-gamete-specific histone H3 male-gamete-specific histone H3 (MGH3); FUNCTIONS IN: DNA binding; INVOLVED IN: double fertilization forming a zygote and endosperm; LOCATED IN: generative cell nucleus, nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, K second mitotic division stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT4G40030.2); Has 14587 Blast hits to 14579 proteins in 7249 species: Archae - 0; Bacteria - 0; Metazoa - 10590; Fungi - 2033; Plants - 1270; Viruses - 0; Other Eukaryotes - 694 (source: NCBI BLink). | 1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G095650 | Histone H3 (AHRD V1 ***- B7XEI9_NICTO)%3B contains Interpro domain(s) IPR000164 Histone H3 | ch01 | - | View |
| SL04G081150 | Histone H3 (AHRD V1 ***- A8MRL0_ARATH)%3B contains Interpro domain(s) IPR000164 Histone H3 | ch04 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV04G00980 | Histone H3.3 name=GSVIVG01018808001; | chr4 | - | View |
| VV18G10020 | Histone H3.3 name=GSVIVG01009838001; | chr18 | - | View |