Anchorpoints

Gene id
PT02G00400
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT04G20850No description available.Chr04+View
PT05G25700No description available.Chr05+View
PT09G16990No description available.Chr09+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G76490Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine hydroxy methylglutaryl CoA reductase 1 hydroxy methylglutaryl CoA reductase 1 (HMG1); CONTAINS InterPro DOMAIN/s: Hydroxymethylglutaryl-CoA reductase, class I, catalytic (InterPro:IPR004554), Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding (InterPro:IPR009029), Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding (InterPro:IPR009023), Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic (InterPro:IPR002202); BEST Arabidopsis thaliana protein match is: 3-hydroxy-3-methylglutaryl-CoA reductase 2 (TAIR:AT2G17370.1); Has 2212 Blast hits to 2210 proteins in 935 species: Archae - 202; Bacteria - 1018; Metazoa - 225; Fungi - 225; Plants - 266; Viruses - 1; Other Eukaryotes - 275 (source: NCBI BLink).1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00070No description available.supercontig_26-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G21060CC_gene:HMGR2,CC_gene:HMGR1,CC_gene:HMG1,CC_gene:HMG3,CC_gene:HMGR,CC_functional_completeness:complete,PRODUCT:3-hydroxy-3-methylglutaryl-coenzyme A reductase,GO:0055114,GO:0050662,GO:0050661,GO:0016021,GO:0015936,GO:0008299,GO:0004420,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.1.1.34chr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS08G401803-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed 3-hydroxy-3-methylglutaryl-coenzyme A reductase 38+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_08G38670No description available.Chr08+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI006G20720No description available.scaffold_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G082260Hydroxy-methylglutaryl-coenzyme A reductase (AHRD V1 **** O48624_TOBAC)%3B contains Interpro domain(s) IPR004554 Hydroxymethylglutaryl-CoA reductase%2C class I%2C catalyticch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G12850name=GSVIVG01013435001;chr18-View
VV03G03180name=GSVIVG01023852001;chr3+View


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Gene id
Species
Description
Chromosome
Strand