Anchorpoints

Gene id
PT01G47320
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G55580Lateral Suppressor (LAS); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: secondary shoot formation, regulation of transcription; LOCATED IN: chloroplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: RGA-like 2 (TAIR:AT3G03450.1); Has 2438 Blast hits to 2402 proteins in 286 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 4; Plants - 2430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). GRAS family transcription factor Encodes a member of the GRAS family of putative transcriptional regulators. It is involved in the initiation of axillary meristems during both the vegetative and reproductive growth phases and functions upstream of REV and AXR1 in the regulation of shoot branching.1+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G07160No description available.Bd3-View
BD1G36180No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00012G00520No description available.supercontig_12+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G20240CC_gene:RGL1,CC_gene:GAI,CC_gene:RGA2,CC_gene:GAI1,CC_gene:RGL2,CC_gene:MOC1,CC_gene:SCL18,CC_functional_completeness:complete,PRODUCT:Putative Scarecrow-like protein 18,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G10360MONOCULM 1, putative, expressed2-View
OS06G40780MONOCULM 1, putative, expressed Protein MONOCULM 16+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G09860No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G023950No description available.chr_10+View
SB04G006636No description available.chr_4-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G22440No description available.scaffold_4-View
SI001G05120No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G066250GRAS family transcription factor (Fragment) (AHRD V1 **-* B1Q3B1_BRACM)%3B contains Interpro domain(s) IPR005202 GRAS transcription factorch07+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G06930name=GSVIVG01014862001;chr19+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G23380No description available.5+View


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Gene id
Species
Description
Chromosome
Strand