Anchorpoints
- Gene id
- PT01G17410
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G20140 | Encodes one of the two RPT2 (26S proteasome subunit RPT2) paralogs: RPT2a (At4g29040) and RPT2b (At2g20140). RPT2b can not complement the rpt2a mutant phenotype. rpt2a rpt2b double mutants are embryo lethal. AAA-type ATPase family protein AAA-type ATPase family protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: proteasome complex, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 31279 Blast hits to 28945 proteins in 3121 species: Archae - 1433; Bacteria - 10368; Metazoa - 4867; Fungi - 3760; Plants - 3280; Viruses - 37; Other Eukaryotes - 7534 (source: NCBI BLink). | 2 | + | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G36830 | No description available. | Bd1 | - | View |
BD3G07700 | No description available. | Bd3 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G11050 | 26S protease regulatory subunit, putative, expressed | 2 | - | View |
OS06G39870 | 26S protease regulatory subunit 8, putative, expressed | 6 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_02G10640 | No description available. | Chr02 | - | View |
OSINDICA_06G35460 | No description available. | Chr06 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB10G023320 | No description available. | chr_10 | + | View |
SB04G007170 | No description available. | chr_4 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI004G23110 | No description available. | scaffold_4 | - | View |
SI001G04410 | No description available. | scaffold_1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV09G06160 | name=GSVIVG01017222001; | chr9 | + | View |