Anchorpoints

Gene id
PT01G17410
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G20140Encodes one of the two RPT2 (26S proteasome subunit RPT2) paralogs: RPT2a (At4g29040) and RPT2b (At2g20140). RPT2b can not complement the rpt2a mutant phenotype. rpt2a rpt2b double mutants are embryo lethal. AAA-type ATPase family protein AAA-type ATPase family protein; FUNCTIONS IN: hydrolase activity, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: proteasome complex, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), 26S proteasome subunit P45 (InterPro:IPR005937); BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1); Has 31279 Blast hits to 28945 proteins in 3121 species: Archae - 1433; Bacteria - 10368; Metazoa - 4867; Fungi - 3760; Plants - 3280; Viruses - 37; Other Eukaryotes - 7534 (source: NCBI BLink).2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G36830No description available.Bd1-View
BD3G07700No description available.Bd3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G1105026S protease regulatory subunit, putative, expressed2-View
OS06G3987026S protease regulatory subunit 8, putative, expressed6+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G10640No description available.Chr02-View
OSINDICA_06G35460No description available.Chr06+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G023320No description available.chr_10+View
SB04G007170No description available.chr_4-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G23110No description available.scaffold_4-View
SI001G04410No description available.scaffold_1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G06160name=GSVIVG01017222001;chr9+View


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Gene id
Species
Description
Chromosome
Strand