Anchorpoints

Gene id
PT01G14210
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT03G09230No description available.Chr03+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G35210root and pollen arfgap (RPA); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy, pollen development; LOCATED IN: nucleus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 3638 Blast hits to 3466 proteins in 238 species: Archae - 0; Bacteria - 14; Metazoa - 1949; Fungi - 623; Plants - 559; Viruses - 0; Other Eukaryotes - 493 (source: NCBI BLink). A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. root and pollen arfgap2+View
AT5G46750ARF-GAP domain 9 ARF-GAP domain 9 (AGD9); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 8 (TAIR:AT4G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.5-View
AT4G17890ARF-GAP domain 8 (AGD8); FUNCTIONS IN: ARF GTPase activator activity, DNA binding, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 9 (TAIR:AT5G46750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ARF-GAP domain 8 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G34180No description available.Bd3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G42420GTPase-activating protein, putative, expressed10-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G32680No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G028250No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G32110No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G005070ADP-ribosylation factor GTPase-activating protein 3 (AHRD V1 **** B6TII3_MAIZE)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch08+View
SL08G076920ADP-ribosylation factor GTPase-activating protein 3 (AHRD V1 **** B6TII3_MAIZE)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch08-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G02260name=GSVIVG01013155001;chr2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G22100No description available.1+View


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Gene id
Species
Description
Chromosome
Strand