Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- PT01G09040
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT03G14120 | No description available. | Chr03 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G23930 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT1G64450.1); Has 327 Blast hits to 319 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 327; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 4 | - | View |
| AT1G64450 | Glycine-rich protein family Glycine-rich protein family; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G23930.1); Has 61689 Blast hits to 17372 proteins in 1170 species: Archae - 25; Bacteria - 6104; Metazoa - 45491; Fungi - 2077; Plants - 2819; Viruses - 1028; Other Eukaryotes - 4145 (source: NCBI BLink). | 1 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G08000 | No description available. | Bd2 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00079G00170 | No description available. | supercontig_79 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G13340 | harpin-induced protein 1 domain containing protein, expressed | 1 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G12680 | No description available. | Chr01 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB03G000650 | No description available. | chr_3 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI005G00570 | No description available. | scaffold_5 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G096000 | Harpin-induced protein (AHRD V1 ***- B6SQ86_MAIZE)%3B contains Interpro domain(s) IPR010847 Harpin-induced 1 | ch01 | + | View |
| SL08G082470 | Harpin-induced protein (AHRD V1 ***- B6SQ86_MAIZE)%3B contains Interpro domain(s) IPR010847 Harpin-induced 1 | ch08 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV15G06710 | name=GSVIVG01027151001; | chr15 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM03G00430 | harpin-induced protein | 3 | - | View |