Anchorpoints
- Gene id
- OSINDICA_07G33660
- Organism
- Oryza sativa ssp. indica
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_03G10160 | No description available. | Chr03 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G60910 | AGAMOUS-like 8 AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). MADS box gene negatively regulated by APETALA1 | 5 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD1G69890 | No description available. | Bd1 | + | View |
BD1G21980 | No description available. | Bd1 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA07G27330 | CC_gene:AGL3,CC_gene:TDR5,CC_gene:FBP2,CC_gene:MADS5,CC_gene:MADS1,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 1,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | + | View |
MA04G14930 | CC_gene:SEP3,CC_gene:FBP2,CC_gene:SEP2,CC_gene:MADS5,CC_gene:MADS1,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 1,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | + | View |
MA03G31210 | CC_gene:TDR4,CC_gene:AP1,CC_gene:MADS18,CC_gene:MADS14,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 14,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G11614 | OsMADS1 - MADS-box family gene with MIKCc type-box, expressed MADS-box transcription factor 1 | 3 | - | View |
OS07G41370 | MADS-box transcription factor 18 OsMADS18 - MADS-box family gene with MIKCc type-box, expressed | 7 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G09840 | No description available. | Chr08 | + | View |
PT17G09970 | No description available. | Chr17 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB01G042840 | No description available. | chr_1 | + | View |
SB02G038780 | No description available. | chr_2 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI002G39200 | No description available. | scaffold_2 | + | View |
SI009G50610 | No description available. | scaffold_9 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G089200 | MADS-box transcription factor (AHRD V1 **** Q3KSZ0_PRUDU)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box | ch02 | + | View |
SL03G114830 | MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-box | ch03 | - | View |
SL05G056620 | Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box | ch05 | - | View |
SL04G005320 | MADS-box transcription factor (AHRD V1 **** Q8S4L4_SOLLC)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box | ch04 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G10760 | name=GSVIVG01012250001; | chr1 | - | View |
VV14G16100 | name=GSVIVG01036549001; | chr14 | - | View |
VV17G04850 | name=GSVIVG01008140001; | chr17 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G26720 | LOC542045 | 7 | - | View |
ZM01G08000 | MADS-box transcription factor 1 | 1 | - | View |