PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: OSINDICA_05G07100
Organism: Oryza sativa ssp. indica

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_01G07380	No description available.	Chr01	-	View

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G80180	Encodes a substrate of the MAPK kinases. Phenotypic analyses of Arabidopsis expressing phosphorylation site mutant forms of At1g80180.1 showed clustered stomata and higher stomatal index in cotyledons expressing the phosphomimetic form of At1g80180.1. unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).	1	-	View

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD2G34180	No description available.	Bd2	+	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA05G06250	CC_gene:Ttc3,CC_gene:CCDC85C,CC_gene:At1g15400,CC_functional_completeness:complete,PRODUCT:Putative Uncharacterized protein At1g15400,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number	chr5	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS05G08390	No description available.	5	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI005G12290	No description available.	scaffold_5	-	View
SI003G10270	No description available.	scaffold_3	-	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM03G03490	No description available.	3	+	View