Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36650plant-specific TFIIB-related protein Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus. plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1560 Blast hits to 1559 proteins in 341 species: Archae - 524; Bacteria - 1; Metazoa - 239; Fungi - 259; Plants - 166; Viruses - 3; Other Eukaryotes - 368 (source: NCBI BLink).4-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G71400No description available.Bd1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G10070transcription initiation factor IIB, putative, expressed3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G02760No description available.Chr07-View
PT05G12490No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G044030No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G52100No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085470Transcription initiation factor IIB (AHRD V1 *-*- B5XD83_SALSA)%3B contains Interpro domain(s) IPR000812 Transcription factor TFIIB relatedch02-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G26690TFIIB-related protein Fragment9+View


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Gene id
Species
Description
Chromosome
Strand