Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G21430No description available.Chr10-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G43410encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Ethylene-responsive element binding factor 14 (TAIR:AT1G04370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G27690No description available.Bd3-View
BD1G75040No description available.Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00044G00660No description available.supercontig_44-View
CP00050G00270No description available.supercontig_50+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G05590AP2 domain containing protein, expressed3+View
OS10G30840AP2 domain containing protein, expressed10-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G22310No description available.Chr05-View
PT02G03900No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G020555No description available.chr_1+View
SB01G046920No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G55440No description available.scaffold_9+View
SI009G24440No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G066340Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch09+View
SL03G005500Ethylene-responsive transcription factor 14 (AHRD V1 **** ERF97_ARATH)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-bindingch03+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G10790name=GSVIVG01028312001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G03740No description available.1+View
ZM05G10730No description available.5+View


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Gene id
Species
Description
Chromosome
Strand