Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- OSINDICA_03G01460
- Organism
- Oryza sativa ssp. indica
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_04G40210 | No description available. | Chr04 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G42010 | Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G64610.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein | 5 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD5G18647 | No description available. | Bd5 | + | View |
| BD1G77510 | No description available. | Bd1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00003G01150 | No description available. | supercontig_3 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA03G18660 | CC_gene:YMR102C,CC_gene:SPBC18H10.05,CC_gene:Wdr44,CC_gene:SPAC3H5.08c,CC_gene:wdr44,CC_gene:WDR44,CC_functional_completeness:complete,PRODUCT:WD repeat-containing protein 44%2C putative%2C expressed,GO:0008601,GO:0007165,GO:0000159,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
| MA04G27950 | CC_gene:YMR102C,CC_gene:SPBC18H10.05,CC_gene:SPAC3H5.08c,CC_gene:Wdr44,CC_gene:WDR44,CC_gene:wdr44,CC_functional_completeness:complete,PRODUCT:WD repeat-containing protein 44%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | + | View |
| MA11G03400 | CC_gene:YMR102C,CC_gene:SPBC18H10.05,CC_gene:SPAC3H5.08c,CC_gene:Wdr44,CC_gene:wdr44,CC_gene:WDR44,CC_functional_completeness:fragment,PRODUCT:Putative Whole genome shotgun sequence of line PN40024%2C scaffold_98.assembly12x (Fragment),CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | - | View |
| MA08G12280 | CC_gene:YMR102C,CC_gene:SPBC18H10.05,CC_gene:wdr44,CC_gene:Wdr44,CC_gene:WDR44,CC_gene:SPAC3H5.08c,CC_functional_completeness:complete,PRODUCT:WD-40 repeat family protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G02440 | WD repeat-containing protein 44, putative, expressed | 3 | + | View |
| OS04G48010 | WD-40 repeat family protein, putative, expressed | 4 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT15G00970 | No description available. | Chr15 | + | View |
| PT12G01820 | No description available. | Chr12 | - | View |
| PT03G14440 | No description available. | Chr03 | - | View |
| PT02G17410 | No description available. | Chr02 | - | View |
| PT01G08660 | No description available. | Chr01 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB06G025690 | No description available. | chr_6 | + | View |
| SB01G049570 | No description available. | chr_1 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G58810 | No description available. | scaffold_9 | - | View |
| SI007G20840 | No description available. | scaffold_7 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G082870 | WD-40 repeat family protein (AHRD V1 ***- D7MSZ0_ARALY)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C region | ch03 | + | View |
| SL08G082900 | WD-40 repeat family protein (AHRD V1 **-- D7KS76_ARALY)%3B contains Interpro domain(s) IPR020472 G-protein beta WD-40 repeat%2C region | ch08 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G05330 | name=GSVIVG01019618001; | chr2 | - | View |
| VV16G09320 | name=GSVIVG01038588001; | chr16 | + | View |
| VV15G06980 | name=GSVIVG01027183001; | chr15 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G01000 | signal transducer | 1 | - | View |