Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G49780plant U-box 26 plant U-box 26 (PUB26); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 25 (TAIR:AT3G19380.1); Has 2464 Blast hits to 2403 proteins in 144 species: Archae - 0; Bacteria - 20; Metazoa - 134; Fungi - 16; Plants - 2081; Viruses - 0; Other Eukaryotes - 213 (source: NCBI BLink).1-View
AT3G19380plant U-box 25 plant U-box 25 (PUB25); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 26 (TAIR:AT1G49780.1); Has 2521 Blast hits to 2449 proteins in 133 species: Archae - 0; Bacteria - 22; Metazoa - 177; Fungi - 24; Plants - 2091; Viruses - 3; Other Eukaryotes - 204 (source: NCBI BLink).3-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G26350CC_gene:SPL11,CC_gene:PUB10,CC_gene:PUB11,CC_gene:PUB22,CC_gene:PUB21,CC_gene:PUB23,CC_gene:PUB26,CC_gene:PUB25,CC_functional_completeness:complete,PRODUCT:U-box domain-containing protein 25,GO:0016567,GO:0005488,GO:0004842,GO:0000151,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA09G08910CC_gene:PUB20,CC_gene:PUB10,CC_gene:PUB13,CC_gene:PUB11,CC_gene:PUB21,CC_gene:PUB23,CC_gene:PUB26,CC_gene:PUB25,CC_functional_completeness:complete,PRODUCT:Putative U-box domain-containing protein 25,GO:0016567,GO:0005488,GO:0004842,GO:0000151,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9+View
MA10G16170CC_gene:PUB30,CC_gene:PUB21,CC_gene:PUB26,CC_gene:PUB20,CC_gene:PUB25,CC_gene:PUB24,CC_gene:PUB22,CC_gene:PUB23,CC_functional_completeness:complete,PRODUCT:Putative E3 ubiquitin-protein ligase PUB23,GO:0016567,GO:0005488,GO:0004842,GO:0000151,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA05G01020CC_gene:PUB29,CC_gene:PUB26,CC_gene:PUB20,CC_gene:PUB21,CC_gene:PUB25,CC_gene:PUB24,CC_gene:PUB22,CC_gene:PUB23,CC_functional_completeness:complete,PRODUCT:Putative E3 ubiquitin-protein ligase PUB23,GO:0016567,GO:0005488,GO:0004842,GO:0000151,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G34410U-box domain-containing protein, putative, expressed2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G14010No description available.Chr04-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G16130No description available.4+View


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Gene id
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Description
Chromosome
Strand