Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
AT4G32040 | KNOTTED1-like homeobox gene 5 A member of Class II KN1-like homeodomain transcription factors factors (together with KNAT3 and KNAT4), with greatest homology to the maize knox1 homeobox protein. Regulates photomorphogenic responses and represses late steps in gibberellin biosynthesis. KNAT5 promoter activity showed cell-type specific pattern along longitudinal root axis, primarily in the epidermis of the distal end of primary root elongation zone. KNOTTED1-like homeobox gene 5 (KNAT5); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.2); Has 6199 Blast hits to 6196 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 2065; Fungi - 300; Plants - 3657; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). | 4 | + | View |
AT5G11060 | KNOTTED1-like homeobox gene 4 (KNAT4); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.1); Has 5905 Blast hits to 5890 proteins in 326 species: Archae - 0; Bacteria - 0; Metazoa - 2030; Fungi - 312; Plants - 3367; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink). KNOTTED1-like homeobox gene 4 A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root. | 5 | + | View |
AT5G25220 | KNOTTED1-like homeobox gene 3 A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia KNOTTED1-like homeobox gene 3 (KNAT3); FUNCTIONS IN: transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to light stimulus, detection of cytokinin stimulus, cellular response to cytokine stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 35 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 4 (TAIR:AT5G11060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | + | View |
Gene id |
Description |
Chromosome |
Strand |
Multiplicon |
MA01G27050 | CC_gene:HOS59,CC_gene:HOS58,CC_gene:KNAT5,CC_gene:LET12,CC_gene:OSH45,CC_gene:KNAT4,CC_gene:KNAT3,CC_functional_completeness:complete,PRODUCT:Homeobox protein knotted-1-like 3,GO:0043565,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
MA10G06110 | CC_gene:HOS59,CC_gene:KNAT5,CC_gene:HOS58,CC_gene:LET12,CC_gene:KNAT4,CC_gene:OSH45,CC_gene:KNAT3,CC_functional_completeness:modules,PRODUCT:homeobox protein knotted-1%2C putative%2C expressed,GO:0043565,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | - | View |
MA03G13670 | CC_gene:HOS59,CC_gene:HOS58,CC_gene:KNAT5,CC_gene:LET12,CC_gene:OSH45,CC_gene:KNAT4,CC_gene:KNAT3,CC_functional_completeness:modules,PRODUCT:homeobox protein knotted-1%2C putative%2C expressed,GO:0043565,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
MA04G20990 | CC_gene:HOS59,CC_gene:HOS58,CC_gene:KNAT5,CC_gene:LET12,CC_gene:KNAT4,CC_gene:OSH45,CC_gene:KNAT3,CC_functional_completeness:complete,PRODUCT:Homeobox protein knotted-1-like 3,GO:0043565,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | - | View |