PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: OSINDICA_01G52570
Organism: Oryza sativa ssp. indica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G62940	encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. acyl-CoA synthetase 5 (ACOS5); CONTAINS InterPro DOMAIN/s: AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: 4-coumarate:CoA ligase 2 (TAIR:AT3G21240.1); Has 80303 Blast hits to 72777 proteins in 3663 species: Archae - 1209; Bacteria - 52830; Metazoa - 3472; Fungi - 4003; Plants - 2782; Viruses - 1; Other Eukaryotes - 16006 (source: NCBI BLink). acyl-CoA synthetase 5	1	+	View
AT3G16170	AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: catalytic activity, AMP binding; INVOLVED IN: metabolic process; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT3G48990.1); Has 81919 Blast hits to 74550 proteins in 3809 species: Archae - 1169; Bacteria - 53765; Metazoa - 3235; Fungi - 4485; Plants - 2227; Viruses - 1; Other Eukaryotes - 17037 (source: NCBI BLink). AMP-dependent synthetase and ligase family protein	3	+	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS01G55590	AMP-binding enzyme, putative, expressed	1	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT01G18550	No description available.	Chr01	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI005G33390	No description available.	scaffold_5	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL12G044300	Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II (AHRD V1 **** C7MWS2_SACVD)%3B contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase	ch12	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV09G04850	name=GSVIVG01017056001;	chr9	-	View