Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- OS12G02520
- Organism
- Oryza sativa ssp. japonica
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS11G02600 | OsMan08 - Endo-Beta-Mannanase, expressed | 11 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G01930 | Encodes a endo-beta-mannanase involved in seed germination. Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT5G66460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Glycosyl hydrolase superfamily protein | 5 | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD4G44336 | No description available. | Bd4 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00086G00720 | No description available. | supercontig_86 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA03G09910 | CC_gene:MAN4,CC_gene:MAN2,CC_gene:MAN8,CC_gene:MAN7,CC_gene:MAN5,CC_gene:MAN6,CC_functional_completeness:complete,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 6,GO:0043169,GO:0005975,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
| MA07G22540 | CC_gene:MAN1,CC_gene:MAN2,CC_gene:MAN5,CC_gene:MAN6,CC_gene:MAN8,CC_gene:MAN7,CC_functional_completeness:complete,PRODUCT:Mannan endo-1%2C4-beta-mannosidase 7,GO:0043169,GO:0005975,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_12G01610 | No description available. | Chr12 | - | View |
| OSINDICA_11G00950 | No description available. | Chr11 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT16G13860 | No description available. | Chr16 | - | View |
| PT06G10990 | No description available. | Chr06 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB05G001260 | No description available. | chr_5 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI007G31070 | No description available. | scaffold_7 | - | View |
| SI008G01180 | No description available. | scaffold_8 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G074920 | Mannan endo-1 4-beta-mannosidase (AHRD V1 ***- B4ADW3_BACPU)%3B contains Interpro domain(s) IPR001547 Glycoside hydrolase%2C family 5 | ch10 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM02G25580 | No description available. | 2 | + | View |