Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G12520Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. copper chaperone for SOD1 copper chaperone for SOD1 (CCS); FUNCTIONS IN: superoxide dismutase copper chaperone activity, superoxide dismutase activity; INVOLVED IN: cellular copper ion homeostasis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc binding (InterPro:IPR001424), Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 2 (TAIR:AT2G28190.1); Has 3500 Blast hits to 3494 proteins in 885 species: Archae - 2; Bacteria - 672; Metazoa - 1229; Fungi - 394; Plants - 875; Viruses - 122; Other Eukaryotes - 206 (source: NCBI BLink).1-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD5G18900No description available.Bd5+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G40580No description available.Chr04+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G11380No description available.Chr01+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G21190No description available.scaffold_7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G07630name=GSVIVG01019902001;chr2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G06820LOC1002837862-View


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Gene id
Species
Description
Chromosome
Strand