Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- OS03G58390
- Organism
- Oryza sativa ssp. japonica
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G23060 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: central cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 1905 Blast hits to 1881 proteins in 164 species: Archae - 0; Bacteria - 4; Metazoa - 1370; Fungi - 69; Plants - 271; Viruses - 4; Other Eukaryotes - 187 (source: NCBI BLink). | 3 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G09140 | No description available. | Bd1 | + | View |
| BD1G05390 | No description available. | Bd1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G10940 | CC_gene:PcgF3,CC_gene:pcgf3,CC_gene:pcgf1,CC_gene:At3g23060,CC_gene:DRIP1,CC_gene:DRIP2,CC_functional_completeness:complete,PRODUCT:E3 ubiquitin protein ligase DRIP2,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G51120 | No description available. | Chr03 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G07780 | No description available. | Chr10 | - | View |
| PT05G05410 | No description available. | Chr05 | + | View |
| PT13G04200 | No description available. | Chr13 | + | View |
| PT05G21900 | No description available. | Chr05 | + | View |
| PT02G04410 | No description available. | Chr02 | - | View |
| PT08G16150 | No description available. | Chr08 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G008520 | No description available. | chr_1 | + | View |
| SB01G005090 | No description available. | chr_1 | - | View |
| SB02G004666 | No description available. | chr_2 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI009G05160 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G084040 | Polycomb group ring finger 1 (AHRD V1 *--- B3DL44_XENTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch06 | - | View |
| SL09G065990 | Polycomb group ring finger 1 (AHRD V1 *--- B3DL44_XENTR)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch09 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G05960 | name=GSVIVG01018105001; | chr5 | + | View |
| VV14G15180 | name=GSVIVG01036276001; | chr14 | + | View |
| VV07G01700 | name=GSVIVG01000748001; | chr7 | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM01G56240 | protein binding protein | 1 | + | View |
| ZM05G04510 | LOC100285109 | 5 | + | View |