Anchorpoints

Gene id
OS02G10300
Organism
Oryza sativa ssp. japonica

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
OS06G40880polygalacturonase, putative, expressed6+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G14040Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Glycoside hydrolase, family 28 (InterPro:IPR000743), Parallel beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07850.1); Has 4149 Blast hits to 4131 proteins in 554 species: Archae - 6; Bacteria - 1102; Metazoa - 14; Fungi - 1429; Plants - 1473; Viruses - 4; Other Eukaryotes - 121 (source: NCBI BLink). Pectin lyase-like superfamily protein3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G07120No description available.Bd3+View
BD1G36090No description available.Bd1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G20490CC_gene:G9,CC_gene:PG1,CC_gene:PG9,CC_gene:PG2C,CC_gene:plaa2,CC_functional_completeness:complete,PRODUCT:Putative Exopolygalacturonase (Fragment),GO:0005975,GO:0004650,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.2.1.67chr1-View
MA04G13640CC_gene:PG2C,CC_gene:At3g15720,CC_gene:ADPG2,CC_gene:ADPG1,CC_functional_completeness:complete,PRODUCT:Putative Polygalacturonase ADPG1,GO:0005975,GO:0004650,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.2.1.67chr4-View
MA09G28350CC_gene:G9,CC_gene:PG1,CC_gene:PG9,CC_gene:PG2C,CC_gene:plaa2,CC_functional_completeness:complete,PRODUCT:Putative Exopolygalacturonase (Fragment),GO:0005975,GO:0004650,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.2.1.67chr9+View
MA07G17370CC_gene:PG9,CC_gene:PG2C,CC_gene:PG1,CC_gene:G9,CC_gene:plaa2,CC_functional_completeness:complete,PRODUCT:Putative Exopolygalacturonase (Fragment),GO:0005975,GO:0004650,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.2.1.67chr7+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_06G36600No description available.Chr06+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G05480No description available.Chr16+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G024000No description available.chr_10-View
SB04G006610No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G22320No description available.scaffold_4-View
SI001G05170No description available.scaffold_1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G07170name=GSVIVG01017354001;chr9+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G13390Exopolygalacturonase Precursor (ExoPG)(EC 3.2.1.67)(Pectinase)(Galacturan 1,4-alpha-galacturonidase) Exopolygalacturonase6-View
ZM05G23430No description available.5-View
ZM04G38120No description available.4-View


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Gene id
Species
Description
Chromosome
Strand