PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: OS02G09720
Organism: Oryza sativa ssp. japonica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G39040	transporter associated with antigen processing protein 2 (TAP2); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; INVOLVED IN: response to aluminum ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 11 (TAIR:AT1G02520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). transporter associated with antigen processing protein 2 Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.	5	+	View

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD3G06577	No description available.	Bd3	-	View

Musa acuminata

Gene id	Description	Chromosome	Strand	Multiplicon
MA04G20610	CC_gene:ABCB9,CC_gene:abcB2,CC_gene:ABCB16,CC_gene:ABCB22,CC_gene:ABCB15,CC_gene:ABCB18,CC_gene:ABCB17,CC_gene:Os02g0190300,CC_functional_completeness:fragment,PRODUCT:Putative multidrug resistance protein,GO:0055085,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44	chr4	+	View
MA03G13180	CC_gene:Abcb4,CC_gene:ABCB10,CC_gene:ABCB22,CC_gene:ABCB15,CC_gene:ABCB17,CC_gene:ABCB18,CC_gene:pmd1,CC_gene:Os02g0190300,CC_functional_completeness:fragment,PRODUCT:Putative multidrug resistance protein,GO:0055085,GO:0016887,GO:0016021,GO:0006810,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.44	chr3	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_02G09100	No description available.	Chr02	-	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB04G006087	No description available.	chr_4	-	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI001G05830	No description available.	scaffold_1	+	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM04G38460	No description available.	4	+	View