Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- OS01G70920
- Organism
- Oryza sativa ssp. japonica
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G02980 | cullin 2 (CUL2); FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: cell cycle, ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex, chloroplast envelope; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G43140.1); Has 2240 Blast hits to 2201 proteins in 240 species: Archae - 0; Bacteria - 18; Metazoa - 947; Fungi - 508; Plants - 372; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). encodes an Arabidopsis cullin cullin 2 | 1 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G60057 | No description available. | Bd2 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00009G01820 | No description available. | supercontig_9 | - | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G67270 | No description available. | Chr01 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB03G045160 | No description available. | chr_3 | + | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI005G45570 | No description available. | scaffold_5 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G067100 | Cullin 1-like protein C (AHRD V1 ***- A0ELU7_PETIN)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminal | ch01 | - | View |
| SL09G074680 | Cullin 1B (AHRD V1 ***- Q711G7_TOBAC)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminal | ch09 | - | View |
| SL01G099290 | Cullin-like protein1 (AHRD V1 ***- Q8LP18_PEA)%3B contains Interpro domain(s) IPR016159 Cullin repeat-like | ch01 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV05G02950 | name=GSVIVG01017738001; | chr5 | - | View |
| VV07G03630 | name=GSVIVG01010966001; | chr7 | + | View |