Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
OS05G11560aquaporin protein, putative, expressed Aquaporin NIP1-35-View
OS02G13870aquaporin protein, putative, expressed Aquaporin NIP1-12-View
OS06G35930aquaporin protein, putative, expressed Aquaporin NIP1-46+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18910NOD26-like intrinsic protein 1;2 Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells. NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink).4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G32890No description available.Bd2+View
BD3G08930No description available.Bd3-View
BD1G38160No description available.Bd1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G06410CC_gene:TIP2-1,CC_gene:TIP4-2,CC_gene:TIP4-3,CC_gene:TIP4-1,CC_gene:TIP4-4,CC_functional_completeness:complete,PRODUCT:Aquaporin TIP4-4,GO:0016020,GO:0006810,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9-View
MA06G15050CC_gene:NIP1-3,CC_gene:NIP1-2,CC_gene:NIP1-1,CC_functional_completeness:complete,PRODUCT:Aquaporin NIP1-1,GO:0055085,GO:0016021,GO:0016020,GO:0006810,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA10G28400CC_gene:NIP1-1,CC_gene:NIP4-1,CC_gene:NIP4-2,CC_gene:NIP1-2,CC_gene:NIP1-3,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0016020,GO:0006810,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G12840No description available.Chr02-View
OSINDICA_05G09840No description available.Chr05-View
OSINDICA_01G09570No description available.Chr01-View
OSINDICA_06G31580No description available.Chr06+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G021770No description available.chr_10+View
SB09G006390No description available.chr_9-View
SB04G008360No description available.chr_4-View
SB03G002490No description available.chr_3+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI003G07360No description available.scaffold_3-View
SI001G02630No description available.scaffold_1+View
SI005G14420No description available.scaffold_5-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL03G005980Transmembrane water channel aquaporin Z (AHRD V1 **** Q3KGD7_PSEPF)%3B contains Interpro domain(s) IPR012269 Aquaporinch03-View
SL08G066840Aquaporin-like protein (AHRD V1 ***- O65860_PICAB)%3B contains Interpro domain(s) IPR012269 Aquaporinch08-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G02650name=GSVIVG01021274001;chr10+View


Download

Gene id
Species
Description
Chromosome
Strand