PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: MA09G05830
Organism: Musa acuminata

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G29690	Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity. constitutively activated cell death 1 (CAD1); CONTAINS InterPro DOMAIN/s: Membrane attack complex component/perforin (MACPF) domain (InterPro:IPR020864); BEST Arabidopsis thaliana protein match is: MAC/Perforin domain-containing protein (TAIR:AT4G24290.2); Has 226 Blast hits to 225 proteins in 30 species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). MAC/Perforin domain-containing protein	1	-	View

Oryza sativa ssp. japonica

Gene id	Description	Chromosome	Strand	Multiplicon
OS01G54510	MAC%2FPerforin domain containing protein, putative, expressed	1	+	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_01G51450	No description available.	Chr01	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G06400	No description available.	Chr04	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB03G034590	No description available.	chr_3	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI005G32510	No description available.	scaffold_5	+	View

Zea mays

Gene id	Description	Chromosome	Strand	Multiplicon
ZM03G31840	No description available.	3	+	View