Anchorpoints

Gene id
MA01G23500
Organism
Musa acuminata

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MA08G31930CC_gene:HOX20,CC_gene:ATHB-53,CC_gene:HOX12,CC_gene:ATHB-40,CC_gene:ATHB-21,CC_gene:HOX14,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View
MA04G14530CC_gene:HOX4,CC_gene:ATHB-53,CC_gene:ATHB-21,CC_gene:ATHB-40,CC_gene:HOX12,CC_gene:HOX14,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4-View
MA04G07320CC_gene:HAT5,CC_gene:ATHB-53,CC_gene:ATHB-21,CC_gene:ATHB-40,CC_gene:HOX12,CC_gene:HOX14,CC_functional_completeness:fragment,PRODUCT:Homeodomain leucine zipper protein class 1,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4+View
MA07G26600CC_gene:ATHB-51,CC_gene:ATHB-53,CC_gene:ATHB-40,CC_gene:ATHB-21,CC_gene:HOX12,CC_gene:HOX14,CC_functional_completeness:fragment,PRODUCT:Homeobox-leucine zipper protein HOX14,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36740Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 40 homeobox protein 40 (HB40); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: ovule, fruit, root, flower; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 21 (TAIR:AT2G18550.1); Has 8534 Blast hits to 8531 proteins in 458 species: Archae - 0; Bacteria - 0; Metazoa - 6212; Fungi - 217; Plants - 1981; Viruses - 4; Other Eukaryotes - 120 (source: NCBI BLink).4-View
AT5G66700homeobox 53 (HB53); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, regulation of transcription, DNA-dependent, root development; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development. homeobox 535+View
AT2G01430homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink). homeobox-leucine zipper protein 172-View
AT2G18550Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. homeobox protein 21 homeobox protein 21 (HB21); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 40 (TAIR:AT4G36740.1); Has 7525 Blast hits to 7522 proteins in 427 species: Archae - 0; Bacteria - 0; Metazoa - 5302; Fungi - 235; Plants - 1881; Viruses - 3; Other Eukaryotes - 104 (source: NCBI BLink).2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G71280No description available.Bd1+View
BD1G23460No description available.Bd1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G39320homeobox domain containing protein, expressed Homeobox-leucine zipper protein HOX147+View
OS03G10210Homeobox-leucine zipper protein HOX12 homeobox domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G08710Homeobox-leucine zipper protein HOX12Chr03-View
OSINDICA_07G31600Homeobox-leucine zipper protein HOX14Chr07+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G02950No description available.Chr07+View
PT08G12950No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G043910No description available.chr_1+View
SB02G037560No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G51970No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G080540Homeobox-leucine zipper protein 14 (AHRD V1 ***- D7LZT3_ARALY)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch10+View
SL02G085630Homeobox-leucine zipper-like protein (AHRD V1 *-*- Q3HRT1_PICGL)%3B contains Interpro domain(s) IPR001356 Homeoboxch02+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G37740No description available.2+View
ZM01G07270No description available.1+View


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Gene id
Species
Description
Chromosome
Strand