Anchorpoints

Gene id
CP00151G00540
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00048G01300No description available.supercontig_48-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G16141GATA type zinc finger transcription factor family protein GATA type zinc finger transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 17 (TAIR:AT3G16870.1); Has 1652 Blast hits to 1613 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 714; Plants - 768; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).4-View
AT3G06740GATA transcription factor 15 (GATA15); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 16 (TAIR:AT5G49300.1); Has 1479 Blast hits to 1431 proteins in 181 species: Archae - 0; Bacteria - 0; Metazoa - 80; Fungi - 586; Plants - 738; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). GATA transcription factor 15 Encodes a member of the GATA factor family of zinc finger transcription factors.3+View
AT5G49300GATA transcription factor 16 (GATA16); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 15 (TAIR:AT3G06740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). GATA transcription factor 16 Encodes a member of the GATA factor family of zinc finger transcription factors.5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G12440No description available.Chr14+View
PT02G19980No description available.Chr02+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G075610GATA transcription factor 22 (AHRD V1 *-*- B6U513_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-typech09-View
SL01G100220GATA transcription factor 22 (AHRD V1 *-*- B6U513_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-typech01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G09300name=GSVIVG01031203001;chr14+View
VV05G12010name=GSVIVG01035048001;chr5+View


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Gene id
Species
Description
Chromosome
Strand