Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CP00131G00270
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G29410 | Ribosomal L28e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L28e (InterPro:IPR002672); BEST Arabidopsis thaliana protein match is: Ribosomal L28e protein family (TAIR:AT2G19730.3); Has 531 Blast hits to 531 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 284; Fungi - 94; Plants - 107; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). Ribosomal L28e protein family | 4 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G51020 | 60S ribosomal protein L28-1, putative, expressed | 1 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_01G48180 | No description available. | Chr01 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT03G04550 | No description available. | Chr03 | - | View |
| PT01G19400 | No description available. | Chr01 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL12G044720 | 60S ribosomal protein L28 (AHRD V1 ***- B3TLS3_ELAGV)%3B contains Interpro domain(s) IPR002672 Ribosomal protein L28e | ch12 | + | View |
| SL06G062500 | 60S ribosomal protein L28 (AHRD V1 ***- B3TLS3_ELAGV)%3B contains Interpro domain(s) IPR002672 Ribosomal protein L28e | ch06 | + | View |
| SL03G121330 | 60S ribosomal protein L28 (AHRD V1 ***- B3TLS3_ELAGV)%3B contains Interpro domain(s) IPR002672 Ribosomal protein L28e | ch03 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV04G07920 | name=GSVIVG01035350001; | chr4 | - | View |
| VV09G03560 | name=GSVIVG01016895001; | chr9 | + | View |