Anchorpoints

Gene id
CP00129G00360
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G37850basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22750.2); Has 2910 Blast hits to 2902 proteins in 174 species: Archae - 4; Bacteria - 2; Metazoa - 77; Fungi - 51; Plants - 2768; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein4-View
AT2G22750basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: sepal; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G37850.1); Has 2965 Blast hits to 2952 proteins in 170 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 48; Plants - 2862; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G12760No description available.Bd1-View
BD1G10170No description available.Bd1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G05310CC_gene:LC,CC_gene:R-S,CC_gene:SCRM2,CC_gene:AIB,CC_gene:NAI1,CC_gene:BHLH18,CC_gene:BHLH19,CC_gene:BHLH25,CC_functional_completeness:fragment,PRODUCT:Putative Transcription factor bHLH25,GO:0030528,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G51580helix-loop-helix DNA-binding domain containing protein, expressed3+View
OS03G12760helix-loop-helix DNA-binding domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G11220No description available.Chr03-View
OSINDICA_03G49890No description available.Chr03+View
OSINDICA_03G45030No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G08140No description available.Chr09+View
PT01G28720No description available.Chr01+View
PT07G00940No description available.Chr07-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G11020No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G091800BHLH transcription factor (AHRD V1 *-*- Q401N5_9LILI)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch02+View
SL01G106460Transcription factor (AHRD V1 **** Q9M4A8_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G03070name=GSVIVG01003701001;chr7+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G05000symbiotic ammonium transporter5+View
ZM01G51370No description available.1-View


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Gene id
Species
Description
Chromosome
Strand