Anchorpoints

Gene id
CP00114G00230
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G09680Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, nucleolus; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT5G02960.1); Has 9046 Blast hits to 9043 proteins in 3116 species: Archae - 259; Bacteria - 5143; Metazoa - 487; Fungi - 298; Plants - 975; Viruses - 0; Other Eukaryotes - 1884 (source: NCBI BLink). Ribosomal protein S12/S23 family protein3-View
AT5G02960Ribosomal protein S12/S23 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cytosolic ribosome, ribosome; EXPRESSED IN: guard cell, leaf; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23, eukaryotic/archaeal (InterPro:IPR005680), Ribosomal protein S12/S23 (InterPro:IPR006032), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Ribosomal protein S12/S23 family protein (TAIR:AT3G09680.1); Has 9074 Blast hits to 9071 proteins in 3107 species: Archae - 259; Bacteria - 5125; Metazoa - 487; Fungi - 294; Plants - 977; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink). Ribosomal protein S12/S23 family protein5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G22897No description available.Bd2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G21710No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G022840No description available.chr_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G08602030S ribosomal protein S12 (AHRD V1 ***- RS12_MYCPU)%3B contains Interpro domain(s) IPR005680 Ribosomal protein S23%2C eukaryotic/archaealch10-View
SL10G08431030S ribosomal protein S12 (AHRD V1 ***- RS12_MYCPU)%3B contains Interpro domain(s) IPR005680 Ribosomal protein S23%2C eukaryotic/archaealch10+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM06G25970No description available.6-View


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Gene id
Species
Description
Chromosome
Strand