Anchorpoints

Gene id
CP00114G00170
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00001G02930No description available.supercontig_1-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G55090ABC-2 type transporter family protein ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G39350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G37630No description available.Bd2-View
BD1G66110No description available.Bd1-View
BD2G54300No description available.Bd2+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G34130CC_gene:ABCG19,CC_gene:ABCG17,CC_gene:ABCG18,CC_gene:ABCG6,CC_gene:ABCG20,CC_gene:ABCG1,CC_gene:ABCG2,CC_gene:ABCG16,CC_functional_completeness:modules,PRODUCT:ABC transporter G family member 16,GO:0017111,GO:0016887,GO:0016020,GO:0005524,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.28chr6+View
MA09G03060CC_gene:ABCG40,CC_gene:PDR7,CC_gene:PDR2,CC_gene:PDR1,CC_gene:PDR4,CC_gene:PDR3,CC_functional_completeness:complete,PRODUCT:Pleiotropic drug resistance protein 3,GO:0017111,GO:0016887,GO:0016020,GO:0005524,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.28chr9+View
MA06G35400CC_gene:ABCG40,CC_gene:PDR7,CC_gene:PDR1,CC_gene:PDR2,CC_gene:PDR4,CC_gene:PDR3,CC_functional_completeness:complete,PRODUCT:Pleiotropic drug resistance protein 3,GO:0017111,GO:0016887,GO:0016020,GO:0005524,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.25chr6-View
MA05G29230CC_gene:ABCG17,CC_gene:ABCG19,CC_gene:ABCG18,CC_gene:ABCG20,CC_gene:ABCG6,CC_gene:ABCG2,CC_gene:ABCG1,CC_gene:ABCG16,CC_functional_completeness:complete,PRODUCT:ABC transporter G family member 16,GO:0017111,GO:0016887,GO:0016020,GO:0005524,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.28chr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17350white-brown complex homolog protein, putative, expressed3+View
OS05G02870white-brown complex homolog protein, putative, expressed5-View
OS01G61940white-brown complex homolog protein, putative, expressed1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_05G01780No description available.Chr05-View
OSINDICA_01G58630No description available.Chr01+View
OSINDICA_03G15960No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G21510No description available.Chr06+View
PT10G21340No description available.Chr10+View
PT08G04790No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G038970No description available.chr_1-View
SB09G001900No description available.chr_9-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G38090No description available.scaffold_5+View
SI003G04190No description available.scaffold_3-View
SI009G46070No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G005970ABC transporter G family member 2 (AHRD V1 ***- AB2G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch09+View
SL05G054890ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch05+View
SL04G010200ABC transporter G family member 6 (AHRD V1 ***- AB6G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporterch04+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G02050name=GSVIVG01025582001;chr8+View
VV13G08790name=GSVIVG01032625001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G32290No description available.8-View
ZM06G04300No description available.6+View
ZM01G11800ATPase, coupled to transmembrane movement of substances1+View
ZM08G21120No description available.8+View


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Gene id
Species
Description
Chromosome
Strand