Anchorpoints

Gene id
CP00107G00860
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G25640Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability. detoxifying efflux carrier 35 (DTX35); FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity; INVOLVED IN: anther dehiscence, flavonoid metabolic process, pollen development; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT4G00350.1). detoxifying efflux carrier 354-View
AT5G52450MATE efflux family protein; FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity, transporter activity; INVOLVED IN: response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: MATE family transporter related protein (InterPro:IPR015521), Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT2G34360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). MATE efflux family protein5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G08680No description available.Chr14-View
PT02G16120No description available.Chr02-View
PT12G14490No description available.Chr12-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094830Receptor-like protein kinase (AHRD V1 **** Q39203_ARATH)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch01-View
SL03G025190Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_YERP3)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch03+View
SL06G036130Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_YERP3)%3B contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatEch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G05590name=GSVIVG01027003001;chr15-View
VV16G08140name=GSVIVG01028885001;chr16-View


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Gene id
Species
Description
Chromosome
Strand