Anchorpoints

Gene id
CP00081G00600
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G46830RAB GTPase homolog A2C RAB GTPase homolog A2C (RABA2c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28770 Blast hits to 28717 proteins in 774 species: Archae - 26; Bacteria - 141; Metazoa - 14934; Fungi - 4337; Plants - 3364; Viruses - 20; Other Eukaryotes - 5948 (source: NCBI BLink).3-View
AT5G59150RAB GTPase homolog A2D (RABA2D); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2C (TAIR:AT3G46830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). RAB GTPase homolog A2D5+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G59670No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G06130No description available.Chr08-View
PT10G19720No description available.Chr10+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G39040No description available.scaffold_5-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G005810Ras-related protein Rab-25 (AHRD V1 ***- RAB25_MOUSE)%3B contains Interpro domain(s) IPR015595 Rab11-relatedch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G04580name=GSVIVG01016457001;chr13-View


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Gene id
Species
Description
Chromosome
Strand