Anchorpoints

Gene id
CP00080G00590
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15355ubiquitin-conjugating enzyme 25 ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink).3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G13080No description available.Chr13+View
PT11G05260No description available.Chr11-View
PT11G11880No description available.Chr11-View
PT01G40030No description available.Chr01+View
PT04G04350No description available.Chr04-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G013820Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch12-View
SL10G007000Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch10-View
SL07G053960Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch07+View
SL02G078210Ubiquitin-conjugating enzyme 22 (AHRD V1 ***- D7L888_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01570name=GSVIVG01020551001;chr12+View
VV19G02980name=GSVIVG01014343001;chr19+View


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Gene id
Species
Description
Chromosome
Strand