Anchorpoints

Gene id
CP00065G01100
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00116G00080No description available.supercontig_116-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G01275RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G38070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G17337No description available.Bd2-View
BD2G46835No description available.Bd2-View
BD2G01580No description available.Bd2-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA09G22230CC_gene:MARCH9,CC_gene:March9,CC_gene:march4,CC_gene:MARCH4,CC_gene:doa10,CC_gene:MARCH11,CC_gene:March11,CC_functional_completeness:complete,PRODUCT:protein binding protein%2C putative%2C expressed,GO:0008270,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G47900protein binding protein, putative, expressed5+View
OS01G03100protein binding protein, putative, expressed1-View
OS01G49280zinc finger family protein, putative, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G46590No description available.Chr01-View
OSINDICA_05G42090No description available.Chr05+View
OSINDICA_01G02420No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G12740No description available.Chr08-View
PT17G12230No description available.Chr17-View
PT10G11560No description available.Chr10+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G007810No description available.chr_3+View
SB03G031510No description available.chr_3-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G28260No description available.scaffold_5-View
SI005G08470No description available.scaffold_5-View
SI003G15720No description available.scaffold_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G007600E3 ubiquitin-protein ligase MARCH3 (AHRD V1 *--- B5X3M1_SALSA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech04+View
SL02G091230E3 ubiquitin-protein ligase MARCH2 (AHRD V1 *--* B5XFT2_SALSA)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech02-View
SL05G008390RING zinc finger-containing protein (AHRD V1 *--- Q54MR8_DICDI)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech05-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G07330name=GSVIVG01030910001;chr14+View
VV01G06870name=GSVIVG01011789001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G02630No description available.8-View
ZM06G30470No description available.6+View


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Gene id
Species
Description
Chromosome
Strand