Anchorpoints

Gene id
CP00062G01350
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G16200structural molecules; FUNCTIONS IN: structural molecule activity; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: membrane coat, Golgi-associated vesicle; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit , appendage (InterPro:IPR014863), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028); BEST Arabidopsis thaliana protein match is: coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative (TAIR:AT4G34450.1). structural molecules2+View
AT4G34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative; FUNCTIONS IN: clathrin binding, structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Coatomer, gamma subunit, appendage, Ig-like subdomain (InterPro:IPR013040), Armadillo-like helical (InterPro:IPR011989), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553), Coatomer, gamma subunit (InterPro:IPR017106), Coatomer, gamma subunit , appendage (InterPro:IPR014863), Armadillo-type fold (InterPro:IPR016024), Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain (InterPro:IPR015873), Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain (InterPro:IPR009028), Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain (InterPro:IPR013041); BEST Arabidopsis thaliana protein match is: structural molecules (TAIR:AT2G16200.1); Has 1647 Blast hits to 1638 proteins in 222 species: Archae - 2; Bacteria - 2; Metazoa - 707; Fungi - 446; Plants - 176; Viruses - 0; Other Eukaryotes - 314 (source: NCBI BLink).4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G69000No description available.Bd1+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G11020No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G11510No description available.Chr09+View
PT04G15350No description available.Chr04+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G109540Coatomer subunit gamma (AHRD V1 ***- B6SV32_MAIZE)%3B contains Interpro domain(s) IPR017106 Coatomer%2C gamma subunitch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G08380name=GSVIVG01031955001;chr3+View


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Gene id
Species
Description
Chromosome
Strand