Anchorpoints
- Gene id
- CP00062G01080
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G59300 | ubiquitin carrier protein 7 ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ubiquitin conjugating enzyme E2 | 5 | - | View |
AT2G18600 | Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), RUB1 conjugating enzyme Ubc12 (InterPro:IPR015580); BEST Arabidopsis thaliana protein match is: RUB1 conjugating enzyme 1 (TAIR:AT4G36800.2); Has 8339 Blast hits to 8336 proteins in 387 species: Archae - 0; Bacteria - 2; Metazoa - 3796; Fungi - 1734; Plants - 1481; Viruses - 20; Other Eukaryotes - 1306 (source: NCBI BLink). Ubiquitin-conjugating enzyme family protein | 2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G12650 | No description available. | Chr05 | - | View |
PT09G11300 | No description available. | Chr09 | + | View |
PT07G03090 | No description available. | Chr07 | - | View |
PT14G04150 | No description available. | Chr14 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G079970 | Ubiquitin-conjugating enzyme E2 11 (AHRD V1 ***- UBC11_ARATH)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2 | ch04 | + | View |
SL12G089030 | Ubiquitin-conjugating enzyme E2 11 (AHRD V1 ***- UBC11_ARATH)%3B contains Interpro domain(s) IPR015580 RUB1 conjugating enzyme Ubc12 | ch12 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV04G02660 | name=GSVIVG01019018001; | chr4 | - | View |
VV03G08110 | name=GSVIVG01031919001; | chr3 | + | View |
VV18G08440 | name=GSVIVG01009655001; | chr18 | + | View |