Anchorpoints
- Gene id
- CP00055G01540
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00062G00110 | No description available. | supercontig_62 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G67000 | encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT5G67010.1); Has 4646 Blast hits to 4643 proteins in 217 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4641; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | 5 | - | View |
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD3G38140 | No description available. | Bd3 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G07050 | CC_gene:ERF114,CC_gene:ERF071,CC_gene:RAP2-3,CC_gene:EREBP1,CC_gene:ERF112,CC_gene:ERF122,CC_gene:ERF113,CC_gene:ERF109,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | - | View |
MA07G19380 | CC_gene:ERF4,CC_gene:ERF114,CC_gene:ERF073,CC_gene:ERF113,CC_gene:ERF112,CC_gene:EREBP1,CC_gene:ERF071,CC_gene:RAP2-3,CC_functional_completeness:fragment,PRODUCT:AP2 domain containing protein%2C expressed,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G52670 | AP2 domain containing protein, expressed | 2 | - | View |
OS08G36920 | AP2 domain containing protein, expressed | 8 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_08G35140 | No description available. | Chr08 | + | View |
OSINDICA_09G22760 | No description available. | Chr09 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT09G10190 | No description available. | Chr09 | + | View |
PT04G14120 | No description available. | Chr04 | + | View |
PT07G04340 | No description available. | Chr07 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB07G023030 | No description available. | chr_7 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI006G18100 | No description available. | scaffold_6 | + | View |
SI001G34440 | No description available. | scaffold_1 | - | View |
SI002G23690 | No description available. | scaffold_2 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G090770 | Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch02 | - | View |
SL01G108240 | Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch01 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV03G06740 | name=GSVIVG01031747001; | chr3 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM02G31680 | No description available. | 2 | + | View |