Anchorpoints

Gene id
CP00055G01530
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00062G00160No description available.supercontig_62+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G37010centrin 2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: DNA repair; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin2 (TAIR:AT3G50360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). centrin 2 Encodes a member of the Centrin family. Mutants are hypersensitive to UV and prone to UV induced DNA damage. Based on sequence similarity and mutant phenotype CEN2 is thought to be involved in nucelotide excision repair/DNA repair.4+View
AT3G50360centrin2 centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink).3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G32200No description available.Bd4-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G10400CC_gene:CML19,CC_gene:CML8,CC_gene:CML20,CC_gene:CML13,CC_functional_completeness:complete,PRODUCT:Probable calcium-binding protein CML13,GO:0005509,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G10250No description available.Chr09+View
PT07G04290No description available.Chr07-View
PT05G13800No description available.Chr05-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G23740No description available.scaffold_2+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G108190Calmodulin-like protein (AHRD V1 ***- Q67TZ4_ORYSJ)%3B contains Interpro domain(s) IPR011992 EF-Hand typech01-View
SL02G090810Calmodulin (AHRD V1 ***- Q1WLX8_CHLIN)%3B contains Interpro domain(s) IPR011992 EF-Hand typech02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G05580name=GSVIVG01022137001;chr7+View


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Gene id
Species
Description
Chromosome
Strand