Anchorpoints

Gene id
CP00048G01500
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G09210calreticulin 1b (CRT1b); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to salt stress; LOCATED IN: mitochondrion, endoplasmic reticulum, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1a (TAIR:AT1G56340.1); Has 5507 Blast hits to 3456 proteins in 438 species: Archae - 6; Bacteria - 291; Metazoa - 2217; Fungi - 528; Plants - 416; Viruses - 176; Other Eukaryotes - 1873 (source: NCBI BLink). Encodes one of three Arabidopsis calreticulins. calreticulin 1b1-View
AT1G56340calreticulin 1a Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. calreticulin 1a (CRT1a); FUNCTIONS IN: unfolded protein binding, calcium ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, response to salt stress, calcium ion homeostasis; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Calreticulin/calnexin, P (InterPro:IPR009033), Calreticulin/calnexin (InterPro:IPR001580), Calreticulin/calnexin, conserved site (InterPro:IPR018124), Calreticulin (InterPro:IPR009169), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: calreticulin 1b (TAIR:AT1G09210.1); Has 12789 Blast hits to 7186 proteins in 689 species: Archae - 27; Bacteria - 946; Metazoa - 4832; Fungi - 1301; Plants - 669; Viruses - 333; Other Eukaryotes - 4681 (source: NCBI BLink).1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA03G24940CC_gene:CRT1,CC_gene:CAL1,CC_gene:CRT2,CC_gene:Os07g0246200,CC_functional_completeness:complete,PRODUCT:Calreticulin,GO:0051082,GO:0006457,GO:0005783,GO:0005509,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G01510No description available.Chr05+View
PT13G00950No description available.Chr13+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G100380Calreticulin 2 calcium-binding protein (AHRD V1 **** A8HMC0_CHLRE)%3B contains Interpro domain(s) IPR009169 Calreticulinch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09210name=GSVIVG01028114001;chr7-View
VV14G09490name=GSVIVG01031229001;chr14+View


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Gene id
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Description
Chromosome
Strand