Anchorpoints

Gene id
CP00048G01310
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00151G00560No description available.supercontig_151-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G09270importin alpha isoform 4 (IMPA-4); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, symbiont intracellular protein transport in host, host response to induction by symbiont of tumor, nodule or growth in host; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 4272 Blast hits to 3104 proteins in 282 species: Archae - 2; Bacteria - 6; Metazoa - 1653; Fungi - 615; Plants - 1226; Viruses - 0; Other Eukaryotes - 770 (source: NCBI BLink). importin alpha isoform 4 Protein interacts with Agrobacterium proteins VirD2 and VirE2.1+View
AT3G05720importin alpha isoform 7 (IMPA-7); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: importin alpha isoform 1 (TAIR:AT3G06720.2); Has 3085 Blast hits to 2425 proteins in 261 species: Archae - 0; Bacteria - 4; Metazoa - 1320; Fungi - 449; Plants - 724; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink). importin alpha isoform 7 Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.3-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G06750CC_gene:KPNA6,CC_gene:Kpna6,CC_gene:DDB_G0272318,CC_gene:KAP2,CC_gene:Os01g0253300,CC_gene:KAP1,CC_gene:Os05g0155500,CC_functional_completeness:complete,PRODUCT:Importin subunit alpha-1b,GO:0008565,GO:0006886,GO:0006606,GO:0005737,GO:0005643,GO:0005634,GO:0005488,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G24060importin subunit alpha, putative, expressed1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G01090No description available.Chr13+View
PT05G02040No description available.Chr05+View
PT14G12420No description available.Chr14+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G013682No description available.chr_3+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G09310name=GSVIVG01031205001;chr14+View
VV07G08950name=GSVIVG01028079001;chr7-View
VV05G12000name=GSVIVG01035047001;chr5+View


Download

Gene id
Species
Description
Chromosome
Strand