Anchorpoints

Gene id
CP00044G01310
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00052G01210No description available.supercontig_52-View
CP00117G00890No description available.supercontig_117-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22910ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G63380.1); Has 44077 Blast hits to 34142 proteins in 3178 species: Archae - 842; Bacteria - 29879; Metazoa - 3977; Fungi - 2621; Plants - 2012; Viruses - 3; Other Eukaryotes - 4743 (source: NCBI BLink).3-View
AT3G63380ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT3G22910.1); Has 46574 Blast hits to 34715 proteins in 3214 species: Archae - 909; Bacteria - 32032; Metazoa - 4086; Fungi - 2666; Plants - 2162; Viruses - 3; Other Eukaryotes - 4716 (source: NCBI BLink). ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein3-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G26890No description available.Bd3-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS10G28240calcium-transporting ATPase, plasma membrane-type, putative, expressed10-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G18850No description available.Chr10-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G15910No description available.Chr08-View
PT02G04750No description available.Chr02+View
PT10G08110No description available.Chr10+View
PT05G21560No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G021870No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G27090No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G082870Calcium-transporting ATPase 1 (AHRD V1 **** Q7XBH9_CERRI)%3B contains Interpro domain(s) IPR006408 ATPase%2C P-type%2C calcium-transporting%2C PMCA-typech09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G04920name=GSVIVG01003129001;chrUn-View
VV14G03190name=GSVIVG01021804001;chr14-View
VV05G05570name=GSVIVG01018058001;chr5-View


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Description
Chromosome
Strand