Anchorpoints

Gene id
CP00044G01260
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G22880DNA repair (Rad51) family protein Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene. DISRUPTION OF MEIOTIC CONTROL 1 (DMC1); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, meiosis, chiasma assembly, reciprocal meiotic recombination, DNA metabolic process; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), DNA repair Rad51/transcription factor NusA, alpha-helical (InterPro:IPR010995), ATPase, AAA+ type, core (InterPro:IPR003593), Meiotic recombinase Dmc1 (InterPro:IPR011940), DNA recombination and repair protein, RecA-like (InterPro:IPR016467), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587), DNA recombination and repair protein Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis thaliana protein match is: RAS associated with diabetes protein 51 (TAIR:AT5G20850.1); Has 11998 Blast hits to 11924 proteins in 3797 species: Archae - 689; Bacteria - 8026; Metazoa - 742; Fungi - 447; Plants - 503; Viruses - 22; Other Eukaryotes - 1569 (source: NCBI BLink).3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G08150No description available.Chr10+View
PT08G15850No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G082790DNA repair and recombination protein RAD51 (AHRD V1 **-- A9CT16_ENTBH)%3B contains Interpro domain(s) IPR011940 Meiotic recombinase Dmc1ch09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G05520name=GSVIVG01018051001;chr5-View


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Gene id
Species
Description
Chromosome
Strand