Anchorpoints

Gene id
CP00036G01340
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G08920cryptochrome 1 cryptochrome 1 (CRY1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal (InterPro:IPR018394), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome C-terminal (InterPro:IPR020978), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome, plant (InterPro:IPR014134), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.4+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G46590No description available.Bd3-View
BD5G11990No description available.Bd5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G37920FAD binding domain of DNA photolyase domain containing protein, expressed4+View
OS02G36380FAD binding domain of DNA photolyase domain containing protein, expressed2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G35190No description available.Chr02+View
OSINDICA_04G29550No description available.Chr04+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G16470No description available.Chr05-View
PT02G09690No description available.Chr02+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G21470No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G057040Cryptochrome 1bch12+View
SL04G074180Cryptochrome 1ach04+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G03560name=GSVIVG01009033001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G17060Cryptochrome 24+View
ZM05G31560cryptochrome 15+View


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Gene id
Species
Description
Chromosome
Strand