Anchorpoints

Gene id
CP00036G01180
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G78120Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT5G65160.1); Has 15465 Blast hits to 9436 proteins in 914 species: Archae - 662; Bacteria - 4043; Metazoa - 4340; Fungi - 1570; Plants - 1564; Viruses - 0; Other Eukaryotes - 3286 (source: NCBI BLink).1-View
AT5G10090Tetratricopeptide repeat (TPR)-like superfamily protein Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT5G65160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G58900No description available.Bd3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G51730dnaJ homolog subfamily C member 7, putative, expressed2-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G49960No description available.Chr02-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07680No description available.Chr05+View
PT05G16630No description available.Chr05+View
PT07G09120No description available.Chr07-View
PT02G09480No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G027610No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G33690No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G073940Tetratricopeptide repeat-containing protein (AHRD V1 **-- D7MT84_ARALY)%3B contains Interpro domain(s) IPR015609 Molecular chaperone%2C heat shock protein%2C Hsp40%2C DnaJch04-View
SL04G055000Tetratricopeptide repeat protein 4 homolog (AHRD V1 *--- TTC4_DICDI)%3B contains Interpro domain(s) IPR015609 Molecular chaperone%2C heat shock protein%2C Hsp40%2C DnaJch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G03400name=GSVIVG01009014001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G40810No description available.5+View


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Gene id
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Description
Chromosome
Strand