Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CP00026G02200
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G20480 | AMP-dependent synthetase and ligase family protein AMP-dependent synthetase and ligase family protein; FUNCTIONS IN: 4-coumarate-CoA ligase activity; INVOLVED IN: phenylpropanoid metabolic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: OPC-8:0 CoA ligase1 (TAIR:AT1G20510.1); Has 83252 Blast hits to 75672 proteins in 3756 species: Archae - 1173; Bacteria - 54045; Metazoa - 3530; Fungi - 4633; Plants - 2807; Viruses - 1; Other Eukaryotes - 17063 (source: NCBI BLink). | 1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA08G13660 | CC_gene:4CLL9,CC_gene:4CLL6,CC_gene:4CLL8,CC_gene:4CLL3,CC_gene:4CLL2,CC_gene:4CLL5,CC_gene:4CLL4,CC_functional_completeness:complete,PRODUCT:4-coumarate--CoA ligase-like 4,GO:0008152,GO:0003824,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:6.2.1.26 | chr8 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS03G04000 | AMP-binding domain containing protein, expressed 4-coumarate--CoA ligase-like 4 | 3 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G02900 | No description available. | Chr03 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G24850 | No description available. | Chr05 | - | View |
| PT02G01280 | No description available. | Chr02 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G048200 | No description available. | chr_1 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL12G094520 | 4-coumarate-coa ligase (AHRD V1 ***- B9MY03_POPTR)%3B contains Interpro domain(s) IPR000873 AMP-dependent synthetase and ligase | ch12 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G00740 | name=GSVIVG01008693001; | chr18 | + | View |